Matplotlib compatibility issues resolved

plotutil.py

@@ -12,18 +12,10 @@ def setup_latex(rcParams, no_fourier=False):
     """
     rcParams['text.usetex'] = True
     if no_fourier:
-        rcParams['text.latex.preamble'] = [
-            r'\usepackage{amsmath}',
-            r'\usepackage{amssymb}',
-            r'\usepackage{graphicx}']
+        rcParams['text.latex.preamble'] = r'\usepackage{amsmath}' + '\n' + r'\usepackage{amssymb}' + '\n' + r'\usepackage{graphicx}'
     else:
-        rcParams['text.latex.preamble'] = [
-            r'\usepackage{amsmath}',
-            r'\usepackage{amssymb}',
-            r'\usepackage{graphicx}',
-            r'\usepackage{fourier}']
+        rcParams['text.latex.preamble'] = r'\usepackage{amsmath}' + '\n' + r'\usepackage{amssymb}' + '\n' + r'\usepackage{graphicx}' + '\n' + r'\usepackage{fourier}'
         rcParams['font.family'] = 'Open Sans'
-    # rcParams['font.serif'] = 'DejaVu Math TeX Gyre'
         rcParams['font.serif'] = 'TeX Gyre Bonum Math'
         rcParams['figure.dpi'] = 120
         rcParams['savefig.dpi'] = 300
@@ -61,8 +53,8 @@ def set_log_axes(axes: plt.Axes, aset=False, aspect=0.36):
     :param axes: an Axis object to operate on.
     """
     axes.tick_params(direction='in', which='both', zorder=4)
-    axes.set_xscale("log", nonposx='clip', subsx=[2, 3, 4, 5, 6, 7, 8, 9])
-    axes.set_yscale("log", nonposy='clip')
+    axes.set_xscale("log", nonpositive='clip', subs=[2, 3, 4, 5, 6, 7, 8, 9])
+    axes.set_yscale("log", nonpositive='clip')
     axes.set_xticks([0.01, 0.03, 0.1, 0.3, 1, 3,
                      10, 30, 50, 100, 300, 1000, 3000,
                      10000, 30000, 100000, 300000, 1000000],
@@ -82,8 +74,8 @@ def set_log_axes_simple(axes: plt.Axes):
     :param axes: an Axis object to operate on.
     """
     axes.tick_params(direction='in', which='both', zorder=4)
-    axes.set_xscale("log", nonposx='clip', subsx=[2, 3, 4, 5, 6, 7, 8, 9])
-    axes.set_yscale("log", nonposy='clip')
+    axes.set_xscale("log", nonpositive='clip', subs=[2, 3, 4, 5, 6, 7, 8, 9])
+    axes.set_yscale("log", nonpositive='clip')
     axes.grid(True, which='both', alpha=0.3, zorder=0)
 
 
@@ -93,7 +85,7 @@ def set_time_log_axes_simple(axes: plt.Axes):
     :param axes: an Axis object to operate on.
     """
     axes.tick_params(direction='in', which='both', zorder=4)
-    axes.set_yscale("log", nonposy='clip')
+    axes.set_yscale("log", nonpositive='clip')
     axes.grid(True, which='both', alpha=0.3, zorder=0)
 
 
@@ -114,8 +106,8 @@ def set_log_axes_2048(axes: plt.Axes):
     :param axes:  an Axis object to operate on.
     """
     axes.tick_params(direction='in', which='both', zorder=4)
-    axes.set_xscale("log", nonposx='clip', basex=2.0)
-    axes.set_yscale("log", nonposy='clip', basey=2.0)
+    axes.set_xscale("log", nonpositive='clip', basex=2.0)
+    axes.set_yscale("log", nonpositive='clip', basey=2.0)
     axes.grid(True, which='both', alpha=0.3, zorder=0)
     axes.set_xticks([1, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024, 2048], minor=False)
     axes.set_yticks([1, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024, 2048], minor=False)
@@ -132,8 +124,8 @@ def set_log_axes_bin16(axes: plt.Axes):
     :param axes: an Axis object to operate on.
     """
     axes.tick_params(direction='in', which='both', zorder=4)
-    axes.set_xscale("log", nonposx='clip', basex=2.0)
-    axes.set_yscale("log", nonposy='clip', basey=2.0)
+    axes.set_xscale("log", nonpositive='clip', basex=2.0)
+    axes.set_yscale("log", nonpositive='clip', basey=2.0)
     axes.grid(True, which='both', alpha=0.3, zorder=0)
     axes.set_xticks([1, 2, 4, 8, 16, 32, 64, 128, 256,
                      512, 1024, 2048, 4096, 8192, 16384, 32768, 65536], minor=False)