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Commits (2)
#!/bin/bash
#: Title : Very simple simulation on the effect of PVE on radiowater PET
#: Date : 2019-03-17
#: Date : 2019-03-30
#: Author : "Vesa Oikonen" <vesa.oikonen@utu.fi>
#: Options : None
......@@ -96,7 +96,7 @@ if [ $? -ne 0 ] ; then printf "Failed!\n" ; exit 1 ; fi
printf "\n=====================================================================\n"
printf " Calculate perfusion \n"
printf " Calculate perfusion using CM fit \n"
printf "=====================================================================\n"
fit_h2o -fpt -Vb=0 -delay=0 -k2 -fit=sim1/cbf_sim1_fit_h2o.tac sim1/blood.tac sim1/ttacsf.tac 999 sim1/fit_h2o.par
......@@ -126,6 +126,13 @@ fit_h2o -fpt -Vb=0 -delay=0 -k2 -svg=sim1/cbf_sim1_fit_h2o_wf.svg sim1/blood.tac
if [ $? -ne 0 ] ; then printf "Failed!\n" ; exit 1 ; fi
printf "\n=====================================================================\n"
printf " Yokoi plot \n"
printf "=====================================================================\n"
yokoi -svg=sim1/cbf_sim1_yokoi.svg sim1/ttacsf.tac sim1/blood.tac 0.5 5 sim1/yokoi.par
if [ $? -ne 0 ] ; then printf "Failed!\n" ; exit 1 ; fi
printf "\n=====================================================================\n"
printf " Calculate perfusion ratio \n"
......
#!/bin/bash
#: Title : Simple simulation on the effect of PVE on radiowater PET
#: Date : 2019-03-22
#: Date : 2019-03-30
#: Author : "Vesa Oikonen" <vesa.oikonen@utu.fi>
#: Options : None
......@@ -137,7 +137,7 @@ if [ $? -ne 0 ] ; then printf "Failed!\n" ; exit 1 ; fi
printf "\n=====================================================================\n"
printf " Calculate perfusion \n"
printf " Calculate perfusion by CM fitting \n"
printf "=====================================================================\n"
printf "K1_lower := 0\n" > sim2/fit_h2o.lim
......@@ -155,6 +155,14 @@ tac2svg -mt="" -legend=y sim2/cbf_sim2_fit_h2o.svg -s sim2/ttacsf.tac -l sim2/cb
if [ $? -ne 0 ] ; then printf "Failed!\n" ; exit 1 ; fi
printf "\n=====================================================================\n"
printf " Yokoi plot \n"
printf "=====================================================================\n"
yokoi -svg=sim2/cbf_sim2_yokoi.svg sim2/ttacsf.tac sim2/blood.tac 0.6 5 sim2/yokoi.par
if [ $? -ne 0 ] ; then printf "Failed!\n" ; exit 1 ; fi
printf "\n=====================================================================\n"
printf " Calculate perfusion ratio \n"
printf "=====================================================================\n"
......