From 7b2af147b2562ff56974b37fb5182122bec4449f Mon Sep 17 00:00:00 2001
From: slhogle <shane.hogle@gmail.com>
Date: Thu, 7 Dec 2023 13:37:28 +0200
Subject: [PATCH] removing weird word doc hidden file

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 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

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 # Overview
 This repository contains the final genome [assemblies](data/assemblies), [logs](data/logs), [reports/summaries](data/reports), [scripts](data/scripts), and methods, for the publication XYZ. All genomes were circularized (or in the case of *Agrobacterium tumefaciens* properly linearized) with the recovery of some small plasmids.
 
-30 Species from the HAMBI community were sent for Oxford Nanopore or PacBio HiFi sequencing at [SeqCenter](https://www.seqcenter.com/) early November 2022. SeqCenter assembled reads using hifiasm assembler and some basic results are in the [`raw_assembly_info.tsv`](raw_assembly_info.tsv). I assembled multiple subsets of the read data for each genome and generated consensus assemblies using [Trycycler](https://github.com/rrwick/Trycycler).
+30 Species from the HAMBI community were sent for Oxford Nanopore or PacBio HiFi sequencing at [SeqCenter](https://www.seqcenter.com/) early November 2022. I assembled multiple subsets of the read data for each genome and generated consensus assemblies using [Trycycler](https://github.com/rrwick/Trycycler).
 
 # Results
 
-- 
GitLab