From 17c62d360a8442b71788406959a814d7e958c6eb Mon Sep 17 00:00:00 2001
From: Deepankar Chakroborty <deepankar.chakroborty@utu.fi>
Date: Wed, 29 Jul 2020 15:02:33 +0300
Subject: [PATCH] point refseq RDS URL to master
---
IsolateCanonicalVariant.R | 5 ++---
1 file changed, 2 insertions(+), 3 deletions(-)
diff --git a/IsolateCanonicalVariant.R b/IsolateCanonicalVariant.R
index a39747e..22e112a 100644
--- a/IsolateCanonicalVariant.R
+++ b/IsolateCanonicalVariant.R
@@ -28,10 +28,9 @@ if(length(missing_packages)) install.packages(missing_packages)
rm(missing_packages,dependencies)
IsolateCanonicalVariant <- function (AAchangeAnnotations){
- library(doParallel)
- #--- Change to master when ready
# importing resources
- refseq <- readRDS(url("https://gitlab.utu.fi/deecha/shared_scripts/-/raw/develop/asset/RefSeqSelect_Gene_Transcript.RDS"),"rb")
+ library(doParallel)
+ refseq <- readRDS(url("https://gitlab.utu.fi/deecha/shared_scripts/-/raw/master/asset/RefSeqSelect_Gene_Transcript.RDS"),"rb")
source("https://gitlab.utu.fi/deecha/shared_scripts/-/raw/master/MutSiteFind.R")
# initializing cluster
--
GitLab